Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs1037470 chr2:3215593 C/T 5.94E-5 111 0 14.7 15.2 KM Plot
LAML rs1037471 chr2:3215503 C/T 5.94E-5 111 0 14.7 15.2 KM Plot
LAML rs10401289 chr19:12562702 T/C 1.05E-5 111 6.63 21.82 13.1 KM Plot
LAML rs10402252 chr19:12541547 T/G 1.87E-5 111 6.13 22.37 13.1 KM Plot
LAML rs10402957 chr19:48254392 C/T 8.06E-7 111 19.23 16.23 5.1 KM Plot
LAML rs10404972 chr19:12576573 G/A 8.24E-5 110 6.13 22.83 13.1 KM Plot
LAML rs10405135 chr19:48258578 A/G 3.21E-7 108 5.1 21.87 15.17 KM Plot
LAML rs10406102 chr19:12577008 G/A 9.09E-6 110 5.62 22.37 13.1 KM Plot
LAML rs10406879 chr19:48258551 T/C 3.21E-7 108 5.1 21.87 15.17 KM Plot
LAML rs10411049 chr19:12561240 G/A 1.05E-5 111 6.63 21.82 13.1 KM Plot
LAML rs10411681 chr19:48243509 A/G 1.16E-5 107 5.62 21.87 15.17 KM Plot
LAML rs10411792 chr19:12553144 G/A 1.05E-5 111 6.63 21.82 13.1 KM Plot
LAML rs10413804 chr19:12534105 C/T 4.1E-6 110 5.62 22.37 13.1 KM Plot
LAML rs10414453 chr19:12555547 T/C 1.05E-5 111 6.63 21.82 13.1 KM Plot
LAML rs10420521 chr19:12562511 C/T 2.35E-6 111 6.13 22.37 13.1 KM Plot